rename
Short Description
sm.hl.rename
: The function allows users to rename any string within a column to another and saved in a new column.
Function
rename(adata, rename, from_column='phenotype', to_column='phenotype_renamed')
Parameters:
Name | Type | Description | Default |
---|---|---|---|
adata |
AnnData object |
required | |
rename |
dict
|
Pass a dictionary with 'values' as elements that need to be altered and 'keys' as the elements that they need to be transformed into. |
required |
from_column |
string
|
Column that need to be modified. |
'phenotype'
|
to_column |
string
|
Modified names will be stored in a new column with this name. |
'phenotype_renamed'
|
Returns:
Name | Type | Description |
---|---|---|
adata |
Modified AnnData Object |
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Source code in scimap/helpers/_rename.py
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